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Psed_5550 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5550" - 2-oxoglutarate synthase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_55502-oxoglutarate synthase (366 aa)    
Predicted Functional Partners:
Psed_5549
2-oxoacid-acceptor oxidoreductase subunit alpha (647 aa)
 
  0.999
sucC
succinyl-CoA ligase (ADP-forming) subunit beta (390 aa)
   
 
  0.952
Psed_5331
succinyl-CoA synthetase subunit alpha (295 aa)
   
 
  0.944
Psed_2717
butyrate--CoA ligase (560 aa)
 
   
  0.929
Psed_0613
Citrate synthase I (434 aa)
   
 
  0.923
Psed_0610
Citrate (Si)-synthase (390 aa)
   
 
  0.923
Psed_4581
Pyruvate, phosphate dikinase (910 aa)
       
  0.921
Psed_2944
Pyruvate, water dikinase (887 aa)
       
  0.921
Psed_2515
Pyruvate, water dikinase (366 aa)
       
  0.921
Psed_2514
PEP-utilizing protein mobile subunit (590 aa)
       
  0.921
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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