STRINGSTRING
Psed_5582 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5582" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5582Hypothetical protein (297 aa)    
Predicted Functional Partners:
Psed_5585
Glyoxalase/bleomycin resistance protein/dioxygenase (144 aa)
 
          0.745
Psed_5583
Transposase IS4 family protein (294 aa)
              0.679
Psed_5584
Nitric oxide dioxygenase (576 aa)
 
          0.670
Psed_5581
Hypothetical protein (178 aa)
              0.648
Psed_2366
Hypothetical protein (320 aa)
 
          0.484
Psed_1275
Hypothetical protein (115 aa)
   
          0.459
Psed_5682
Hypothetical protein (102 aa)
   
          0.452
Psed_0313
Glyoxalase/bleomycin resistance protein/dioxygenase (135 aa)
 
          0.440
Psed_6169
Glyoxalase/bleomycin resistance protein/dioxygenase (126 aa)
   
          0.428
egtD
Methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine (330 aa)
              0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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