STRINGSTRING
Psed_5584 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5584" - Nitric oxide dioxygenase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5584Nitric oxide dioxygenase (576 aa)    
Predicted Functional Partners:
Psed_5585
Glyoxalase/bleomycin resistance protein/dioxygenase (144 aa)
 
          0.844
Psed_6551
Nitric oxide dioxygenase (398 aa)
 
  0.728
Psed_6536
Pyridoxamine 5’-phosphate oxidase-related FMN-binding protein (304 aa)
            0.689
Psed_5583
Transposase IS4 family protein (294 aa)
              0.684
Psed_5582
Hypothetical protein (297 aa)
 
          0.670
Psed_0630
ferredoxin--NAD(+) reductase (351 aa)
   
0.623
Psed_4994
Alcohol dehydrogenase (314 aa)
 
     
  0.612
Psed_4997
Oxidoreductase FAD-binding domain-containing protein (240 aa)
   
0.611
Psed_5921
Oxidoreductase FAD-binding domain-containing protein (243 aa)
   
0.607
Psed_2727
uroporphyrin-III C-methyltransferase (403 aa)
   
   
  0.601
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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