STRINGSTRING
Psed_5588 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5588" - 2,2-dialkylglycine decarboxylase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_55882,2-dialkylglycine decarboxylase (428 aa)    
Predicted Functional Partners:
Psed_3994
Aromatic-L-amino-acid decarboxylase (493 aa)
 
 
  0.827
Psed_2046
Glutamate decarboxylase (466 aa)
   
 
  0.824
Psed_2026
Glutamate decarboxylase (473 aa)
   
 
  0.824
Psed_5589
ABC transporter (546 aa)
              0.805
Psed_6458
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) (458 aa)
   
 
  0.712
Psed_3762
Methylmalonate-semialdehyde dehydrogenase (498 aa)
 
 
  0.712
Psed_3350
Succinate-semialdehyde dehydrogenase (489 aa)
   
 
  0.712
Psed_2977
Betaine-aldehyde dehydrogenase (491 aa)
   
 
  0.712
Psed_2510
Aldehyde dehydrogenase (508 aa)
   
 
  0.712
Psed_2162
Lactaldehyde dehydrogenase (485 aa)
   
 
  0.712
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (10%) [HD]