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Psed_5601 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5601" - SH3 type 3 domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5601SH3 type 3 domain-containing protein (429 aa)    
Predicted Functional Partners:
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK) (293 aa)
              0.847
Psed_3624
Hypothetical protein (131 aa)
   
          0.590
Psed_5357
Regulatory protein MerR (365 aa)
   
          0.586
Psed_5600
o-succinylbenzoate--CoA ligase (387 aa)
              0.535
Psed_1446
Hypothetical protein (159 aa)
   
          0.490
Psed_4591
Hypothetical protein (268 aa)
   
          0.482
Psed_5928
Hypothetical protein (164 aa)
   
          0.475
Psed_5531
DNA translocase FtsK (497 aa)
   
          0.418
Psed_1737
Signal transduction histidine kinase (379 aa)
   
          0.418
Psed_1161
LysR family transcriptional regulator (309 aa)
   
          0.418
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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