STRINGSTRING
Psed_5621 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5621" - beta-Ig-H3/fasciclin in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5621beta-Ig-H3/fasciclin (227 aa)    
Predicted Functional Partners:
Psed_5622
Oxidoreductase molybdopterin binding protein (606 aa)
 
          0.824
Psed_3117
Na+/H+ antiporter (527 aa)
 
 
    0.659
Psed_4896
Na+/H+ antiporter (529 aa)
 
 
    0.627
Psed_0239
Sodium/hydrogen exchanger (433 aa)
 
 
    0.612
Psed_5902
Sodium/hydrogen exchanger (421 aa)
 
 
    0.603
Psed_4699
Hypothetical protein (257 aa)
 
        0.575
Psed_4698
Amine oxidase (429 aa)
 
   
  0.485
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (327 aa)
   
        0.471
Psed_4702
Hypothetical protein (277 aa)
 
        0.453
rex
Redox-sensing transcriptional repressor rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state (278 aa)
              0.441
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (9%) [HD]