STRINGSTRING
Psed_5628 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5628" - Phospholipid/glycerol acyltransferase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5628Phospholipid/glycerol acyltransferase (489 aa)    
Predicted Functional Partners:
Psed_5629
NAD-dependent epimerase/dehydratase (345 aa)
 
      0.975
Psed_6498
Oxyanion-translocating ATPase (342 aa)
 
        0.751
Psed_6497
Oxyanion-translocating ATPase (393 aa)
 
        0.749
Psed_2769
Cyclase (144 aa)
 
          0.747
Psed_6600
acyl-CoA dehydrogenase (619 aa)
   
   
  0.629
Psed_1118
ABC transporter (456 aa)
 
        0.572
Psed_2932
NGG1p interacting factor 3 protein, NIF3 (383 aa)
   
        0.561
gpsA
Glycerol-3-phosphate dehydrogenase (336 aa)
   
 
  0.551
cmk
Cytidylate kinase (236 aa)
   
   
  0.541
Psed_3127
Ribonuclease BN (409 aa)
 
     
  0.525
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (6%) [HD]