STRINGSTRING
Psed_5631 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5631" - Excisionase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5631Excisionase (70 aa)    
Predicted Functional Partners:
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (270 aa)
              0.705
Psed_1507
Hypothetical protein (185 aa)
   
          0.646
Psed_5629
NAD-dependent epimerase/dehydratase (345 aa)
              0.575
Psed_2893
Hypothetical protein (197 aa)
   
          0.560
Psed_5182
Lipoprotein LpqB, beta-propeller domain-containing protein (570 aa)
   
          0.559
Psed_5630
Hypothetical protein (33 aa)
              0.509
Psed_2903
TAP domain-containing protein (539 aa)
   
          0.496
Psed_5628
Phospholipid/glycerol acyltransferase (489 aa)
              0.489
Psed_2132
Hypothetical protein (162 aa)
   
          0.469
Psed_6226
Hypothetical protein (303 aa)
   
          0.468
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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