STRINGSTRING
Psed_5634 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5634" - Proline dehydrogenase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5634Proline dehydrogenase (311 aa)    
Predicted Functional Partners:
Psed_5167
Delta-1-pyrroline-5-carboxylate dehydrogenase (547 aa)
  0.988
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (270 aa)
   
  0.950
Psed_1335
Ornithine cyclodeaminase/mu-crystallin (304 aa)
       
  0.905
Psed_5633
Aromatic compounds degradation protein PaaI (284 aa)
              0.863
Psed_6617
Na+/solute symporter (563 aa)
 
   
  0.794
Psed_5635
Xylose isomerase domain-containing protein (280 aa)
   
        0.714
Psed_1899
Aldehyde dehydrogenase (474 aa)
 
 
  0.695
Psed_5637
Ppx/GppA phosphatase (332 aa)
              0.695
Psed_2977
Betaine-aldehyde dehydrogenase (491 aa)
 
 
  0.691
Psed_5636
Hypothetical protein (487 aa)
              0.686
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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