STRINGSTRING
Psed_5686 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5686" - 3-oxoacyl-ACP reductase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_56863-oxoacyl-ACP reductase (252 aa)    
Predicted Functional Partners:
Psed_5687
2,4-dienoyl-CoA reductase (650 aa)
              0.859
Psed_2253
Short-chain dehydrogenase/reductase SDR (254 aa)
   
          0.749
Psed_6326
Short-chain dehydrogenase/reductase SDR (244 aa)
   
          0.687
Psed_0928
Short-chain dehydrogenase/reductase SDR (274 aa)
 
          0.660
Psed_1076
Short-chain dehydrogenase/reductase SDR (301 aa)
   
          0.515
Psed_5688
Hypothetical protein (252 aa)
              0.514
Psed_6298
Short-chain dehydrogenase/reductase SDR (233 aa)
   
          0.506
Psed_4515
Xenobiotic-transporting ATPase (1596 aa)
   
        0.447
Psed_2512
Short-chain dehydrogenase/reductase SDR (246 aa)
   
          0.443
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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