STRINGSTRING
Psed_5707 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5707" - Peptidase S1 and S6 chymotrypsin/Hap in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5707Peptidase S1 and S6 chymotrypsin/Hap (299 aa)    
Predicted Functional Partners:
Psed_1509
Mov34/MPN/PAD-1 family protein (157 aa)
     
    0.844
Psed_6193
Xenobiotic-transporting ATPase (630 aa)
   
 
  0.835
Psed_5110
Xenobiotic-transporting ATPase (1286 aa)
   
 
  0.835
Psed_4515
Xenobiotic-transporting ATPase (1596 aa)
   
 
  0.835
Psed_3106
Xenobiotic-transporting ATPase (637 aa)
   
 
  0.835
Psed_2630
Xenobiotic-transporting ATPase (600 aa)
   
 
  0.835
Psed_2554
Xenobiotic-transporting ATPase (616 aa)
   
 
  0.835
Psed_0310
Xenobiotic-transporting ATPase (577 aa)
   
 
  0.835
Psed_0309
Xenobiotic-transporting ATPase (668 aa)
   
 
  0.835
Psed_2293
Molecular chaperone DnaJ (130 aa)
   
  0.834
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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