STRINGSTRING
Psed_5720 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5720" - Phage shock protein C, PspC in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5720Phage shock protein C, PspC (99 aa)    
Predicted Functional Partners:
Psed_6200
PspA/IM30 family protein (212 aa)
   
 
  0.856
Psed_4620
Phage shock protein A, PspA (272 aa)
   
 
  0.856
Psed_4588
Hypothetical protein (117 aa)
   
 
  0.856
Psed_5721
Hypothetical protein (109 aa)
              0.614
Psed_4822
Histidine kinase (470 aa)
   
 
 
  0.508
Psed_6031
Response regulator receiver protein (149 aa)
     
      0.452
Psed_2758
Hypothetical protein (182 aa)
     
      0.452
Psed_2308
Response regulator receiver modulated serine phosphatase (562 aa)
     
      0.452
Psed_0436
Response regulator receiver protein (147 aa)
     
      0.452
Psed_0434
Response regulator receiver modulated serine phosphatase (397 aa)
     
      0.452
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (7%) [HD]