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Psed_5723 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5723" - Type III restriction protein res subunit in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
Psed_5723Type III restriction protein res subunit (553 aa)    
Predicted Functional Partners:
Psed_1502
Helicase c2 (678 aa)
   
  0.953
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (92 aa)
     
    0.944
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (347 aa)
     
    0.919
Psed_3588
DNA polymerase I (939 aa)
   
  0.919
Psed_3283
5’-3’ exonuclease (312 aa)
   
  0.914
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1300 aa)
     
  0.913
Psed_5323
Hypothetical protein (735 aa)
 
    0.869
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1175 aa)
     
  0.866
Psed_0225
Cyclophilin type peptidyl-prolyl cis-trans isomerase (234 aa)
   
    0.861
Psed_3577
Cyclophilin type peptidyl-prolyl cis-trans isomerase (266 aa)
   
    0.860
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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