STRINGSTRING
Psed_5729 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5729" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5729Hypothetical protein (750 aa)    
Predicted Functional Partners:
Psed_5728
Hypothetical protein (196 aa)
              0.859
Psed_5723
Type III restriction protein res subunit (553 aa)
 
          0.796
Psed_5730
Hypothetical protein (59 aa)
              0.716
Psed_5199
Hypothetical protein (368 aa)
   
          0.705
Psed_5731
Hypothetical protein (198 aa)
              0.637
Psed_3865
Hypothetical protein (413 aa)
   
        0.611
Psed_3400
Mannosyltransferase (534 aa)
   
        0.603
Psed_2782
Hypothetical protein (585 aa)
   
          0.603
crgA
Hypothetical protein; Involved in cell division (85 aa)
   
          0.574
Psed_0452
Hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands (214 aa)
   
          0.564
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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