STRINGSTRING
Psed_5773 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5773" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5773Hypothetical protein (96 aa)    
Predicted Functional Partners:
Psed_5774
Hypothetical protein (92 aa)
              0.644
Psed_5772
Hypothetical protein (343 aa)
              0.529
Psed_5771
Hypothetical protein (178 aa)
              0.529
Psed_5779
Hypothetical protein (85 aa)
              0.436
Psed_5778
DNA translocase FtsK (672 aa)
              0.436
Psed_5777
Hypothetical protein (99 aa)
              0.436
Psed_5776
Hypothetical protein (261 aa)
              0.436
Psed_5775
Hypothetical protein (34 aa)
              0.436
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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