STRINGSTRING
Psed_5785 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5785" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5785Hypothetical protein (174 aa)    
Predicted Functional Partners:
Psed_5786
Phage terminase (524 aa)
              0.859
Psed_5789
Hypothetical protein (123 aa)
              0.796
Psed_5788
Peptidase S14 ClpP (433 aa)
              0.796
Psed_5787
Hypothetical protein (417 aa)
              0.796
Psed_5791
Hypothetical protein (104 aa)
              0.769
Psed_5790
Hypothetical protein (307 aa)
              0.769
Psed_5793
Hypothetical protein (159 aa)
              0.757
Psed_5792
Hypothetical protein (148 aa)
              0.757
Psed_5796
Hypothetical protein (124 aa)
              0.573
Psed_5795
Hypothetical protein (164 aa)
              0.573
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (13%) [HD]