STRINGSTRING
Psed_5814 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5814" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5814Hypothetical protein (264 aa)    
Predicted Functional Partners:
Psed_5815
Hypothetical protein (84 aa)
              0.859
Psed_5813
Hypothetical protein (88 aa)
              0.859
Psed_5812
Hypothetical protein (213 aa)
              0.859
Psed_5811
Hypothetical protein (94 aa)
              0.715
Psed_5322
(S)-2-hydroxy-acid oxidase (415 aa)
     
      0.596
Psed_5175
(S)-2-hydroxy-acid oxidase (406 aa)
     
      0.596
Psed_4052
(S)-2-hydroxy-acid oxidase (392 aa)
     
      0.596
Psed_2598
(S)-2-hydroxy-acid oxidase (407 aa)
     
      0.596
Psed_5810
Hypothetical protein (54 aa)
              0.554
Psed_5809
Hypothetical protein (33 aa)
              0.554
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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