STRINGSTRING
Psed_5894 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5894" - Rieske in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5894Rieske (2Fe-2S) domain-containing protein (385 aa)    
Predicted Functional Partners:
Psed_4289
Aromatic-ring-hydroxylating dioxygenase subunit beta (170 aa)
 
 
  0.947
Psed_5893
Hypothetical protein (140 aa)
              0.638
Psed_5584
Nitric oxide dioxygenase (576 aa)
 
   
  0.567
Psed_4325
Nitric oxide dioxygenase (567 aa)
 
   
  0.560
Psed_5895
Hypothetical protein (403 aa)
              0.557
Psed_4919
Sarcosine oxidase subunit delta (83 aa)
 
        0.547
Psed_6319
Rieske (2Fe-2S) domain-containing protein (145 aa)
   
 
  0.542
Psed_6060
Rieske (2Fe-2S) domain-containing protein (132 aa)
   
 
  0.542
Psed_4208
Rieske (2Fe-2S) domain-containing protein (118 aa)
   
 
  0.542
Psed_2582
Rieske (2Fe-2S) domain-containing protein (131 aa)
   
 
  0.542
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (8%) [HD]