STRINGSTRING
Psed_5914 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5914" - Hydantoinase B/oxoprolinase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5914Hydantoinase B/oxoprolinase (684 aa)    
Predicted Functional Partners:
Psed_5913
5-oxoprolinase (739 aa)
 
   
  0.984
Psed_5911
Hydantoinase/oxoprolinase (627 aa)
 
   
  0.984
Psed_5912
Acetone carboxylase subunit gamma (125 aa)
 
     
  0.979
Psed_6337
5-oxoprolinase (706 aa)
   
  0.892
Psed_5504
5-oxoprolinase (695 aa)
   
  0.892
Psed_4637
5-oxoprolinase (681 aa)
   
  0.892
Psed_3555
5-oxoprolinase (696 aa)
   
  0.892
Psed_3232
5-oxoprolinase (697 aa)
   
  0.892
Psed_2953
5-oxoprolinase (685 aa)
   
  0.892
Psed_2669
5-oxoprolinase (678 aa)
   
  0.892
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (13%) [HD]