STRINGSTRING
Psed_5926 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5926" - AMP-dependent synthetase/ligase in Pseudonocardia dioxanivorans
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5926AMP-dependent synthetase/ligase (458 aa)    
Predicted Functional Partners:
Psed_5927
Aminoglycoside phosphotransferase (328 aa)
              0.801
Psed_5910
phenylacetate--CoA ligase (461 aa)
   
          0.747
Psed_5925
Cation diffusion facilitator family transporter (333 aa)
              0.698
Psed_4284
Extradiol ring-cleavage dioxygenase class III protein subunit B (357 aa)
   
          0.692
Psed_0649
3-hydroxybutyryl-CoA epimerase (720 aa)
   
   
  0.674
Psed_2198
Hypothetical protein (254 aa)
   
          0.662
Psed_2696
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) (441 aa)
   
          0.659
Psed_3987
Pyruvate/ketoisovalerate oxidoreductase (1183 aa)
         
  0.638
Psed_1463
Indolepyruvate ferredoxin oxidoreductase (1145 aa)
         
  0.638
Psed_5924
Glycoside hydrolase 15-like protein (607 aa)
              0.598
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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