STRINGSTRING
Psed_5947 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5947" - Oxidoreductase molybdopterin binding protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5947Oxidoreductase molybdopterin binding protein (396 aa)    
Predicted Functional Partners:
Psed_5948
Hypothetical protein (154 aa)
              0.876
Psed_5949
Hypothetical protein (429 aa)
 
          0.790
Psed_5943
Type 12 methyltransferase (203 aa)
 
          0.786
Psed_5940
UDP-glucose 4-epimerase (351 aa)
 
          0.771
Psed_5942
Hypothetical protein (223 aa)
 
          0.770
Psed_5946
Winged helix family two component transcriptional regulator (260 aa)
 
          0.716
Psed_5945
Histidine kinase (348 aa)
 
          0.710
Psed_5941
Family 2 glycosyl transferase (215 aa)
 
          0.692
Psed_1955
Glutamate synthase (1522 aa)
   
   
  0.647
Psed_4522
Hypothetical protein (197 aa)
   
          0.642
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (10%) [HD]