STRINGSTRING
Psed_5981 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5981" - Cyclopentanone monooxygenase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5981Cyclopentanone monooxygenase (546 aa)    
Predicted Functional Partners:
Psed_5982
Beta-lactamase domain-containing protein (269 aa)
 
        0.596
Psed_1769
Xanthine permease (619 aa)
   
        0.553
Psed_3640
Hypothetical protein (109 aa)
 
     
  0.530
Psed_5980
Fis family transcriptional regulator (605 aa)
              0.520
Psed_6232
AIR synthase-like protein domain-containing protein (332 aa)
 
     
  0.510
Psed_6285
Hypothetical protein (161 aa)
 
     
  0.497
Psed_1625
Hypothetical protein (275 aa)
 
     
  0.496
Psed_5106
Radical SAM domain-containing protein (408 aa)
         
  0.458
Psed_6441
Beta-lactamase (400 aa)
 
        0.458
Psed_1767
Hydroxyisourate hydrolase (98 aa)
   
        0.430
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (11%) [HD]