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Psed_6054 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6054" - Cytidyltransferase-related domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6054Cytidyltransferase-related domain-containing protein (279 aa)    
Predicted Functional Partners:
Psed_3429
Riboflavin synthase subunit alpha (210 aa)
 
  0.939
Psed_2275
FAD synthetase (243 aa)
   
   
 
0.920
Psed_3098
Cytidyltransferase-related domain-containing protein (264 aa)
   
   
 
0.919
Psed_4666
Riboflavin biosynthesis protein RibF (308 aa)
   
   
 
0.908
Psed_2975
NADPH-dependent FMN reductase (181 aa)
         
    0.900
Psed_6056
ferredoxin--NAD(+) reductase (432 aa)
              0.859
Psed_6055
Hypothetical protein (60 aa)
              0.859
Psed_6053
Hypothetical protein (160 aa)
              0.859
Psed_6057
Molecular chaperone GroES (354 aa)
   
        0.835
Psed_6060
Rieske (2Fe-2S) domain-containing protein (132 aa)
              0.792
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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