STRINGSTRING
Psed_6135 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6135" - Endoribonuclease L-PSP in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6135Endoribonuclease L-PSP (130 aa)    
Predicted Functional Partners:
Psed_6134
Ureidoglycolate lyase (280 aa)
   
        0.864
Psed_6140
Carbon-monoxide dehydrogenase (830 aa)
              0.863
Psed_6137
ATPase (306 aa)
              0.863
Psed_6138
Carbon-monoxide dehydrogenase (200 aa)
              0.861
Psed_6139
Molybdopterin dehydrogenase FAD-binding protein (278 aa)
              0.859
Psed_6136
Von Willebrand factor A (405 aa)
              0.859
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (699 aa)
     
  0.849
Psed_3602
Small GTP-binding protein (717 aa)
     
  0.849
Psed_6141
Hypothetical protein (134 aa)
              0.840
Psed_6142
FAD dependent oxidoreductase (376 aa)
              0.821
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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