STRINGSTRING
Psed_6152 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6152" - Survival protein SurE in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6152Survival protein SurE (269 aa)    
Predicted Functional Partners:
Psed_5185
Thymidylate kinase (214 aa)
   
    0.975
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis (187 aa)
   
 
  0.940
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (526 aa)
       
    0.936
Psed_5351
Inosine-5’-monophosphate dehydrogenase (501 aa)
   
  0.931
Psed_0954
IMP dehydrogenase (483 aa)
   
  0.931
Psed_1621
Fumarate lyase (451 aa)
       
    0.920
Psed_0428
Adenylosuccinate lyase (472 aa)
       
    0.920
Psed_5350
IMP dehydrogenase (374 aa)
   
 
  0.913
cmk
Cytidylate kinase (236 aa)
   
 
    0.912
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (426 aa)
       
    0.910
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (8%) [HD]