STRINGSTRING
Psed_6169 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6169" - Glyoxalase/bleomycin resistance protein/dioxygenase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6169Glyoxalase/bleomycin resistance protein/dioxygenase (126 aa)    
Predicted Functional Partners:
Psed_6170
Regulatory protein MerR (134 aa)
              0.640
Psed_3107
Hypothetical protein (306 aa)
   
          0.544
Psed_6199
Molecular chaperone DnaJ (405 aa)
   
          0.505
Psed_3777
Glyoxalase/bleomycin resistance protein/dioxygenase (128 aa)
   
          0.498
Psed_6325
Winged helix family transcriptional regulator (1029 aa)
   
          0.464
Psed_2036
Bifunctional deaminase-reductase domain-containing protein (202 aa)
   
          0.462
Psed_4140
Winged helix family transcriptional regulator (992 aa)
   
          0.456
Psed_6435
(R)-6-hydroxynicotine oxidase (466 aa)
   
          0.451
Psed_0066
Winged helix family transcriptional regulator (935 aa)
   
          0.445
Psed_6466
PucR family transcriptional regulator (531 aa)
   
          0.444
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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