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Psed_6212 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6212" - Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6212Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (332 aa)    
Predicted Functional Partners:
Psed_3664
Galactokinase (392 aa)
 
 
  0.765
Psed_2488
Ribonuclease H (210 aa)
 
        0.725
Psed_5635
Xylose isomerase domain-containing protein (280 aa)
   
   
  0.706
Psed_3711
Xylose isomerase domain-containing protein (295 aa)
   
   
  0.706
Psed_2595
Xylose isomerase domain-containing protein (267 aa)
   
   
  0.706
Psed_2264
Xylose isomerase domain-containing protein (286 aa)
   
   
  0.706
Psed_0264
Xylose isomerase domain-containing protein (266 aa)
   
   
  0.706
Psed_1855
Hypothetical protein (191 aa)
 
   
  0.631
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (307 aa)
              0.614
Psed_6213
2’-5’ RNA ligase; Hydrolyzes RNA 2’,3’-cyclic phosphodiester to an RNA 2’- phosphomonoester (186 aa)
              0.611
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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