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Psed_6213 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6213" - 2'-5' RNA ligase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
Psed_62132’-5’ RNA ligase; Hydrolyzes RNA 2’,3’-cyclic phosphodiester to an RNA 2’- phosphomonoester (186 aa)    
Predicted Functional Partners:
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (307 aa)
              0.863
Psed_6215
Carbon-monoxide dehydrogenase (153 aa)
              0.859
Psed_6216
Carbon-monoxide dehydrogenase (266 aa)
              0.845
Psed_6217
enoyl-CoA hydratase (248 aa)
              0.682
Psed_6219
3-oxoacyl-ACP reductase (254 aa)
              0.681
Psed_6218
Carbon-monoxide dehydrogenase (788 aa)
              0.681
Psed_6220
Beta-lactamase (264 aa)
              0.665
Psed_6221
long-chain-fatty-acid--CoA ligase (509 aa)
              0.663
Psed_6212
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (332 aa)
              0.611
Psed_1561
Competence/damage-inducible protein CinA (432 aa)
   
        0.580
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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