STRINGSTRING
Psed_6231 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6231" - Cupin in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6231Cupin (206 aa)    
Predicted Functional Partners:
Psed_5386
Helix-turn-helix domain-containing protein (175 aa)
   
          0.777
Psed_5487
Helix-turn-helix domain-containing protein (196 aa)
   
          0.760
Psed_6232
AIR synthase-like protein domain-containing protein (332 aa)
              0.679
Psed_3345
S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine (399 aa)
         
  0.640
Psed_6233
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid (307 aa)
              0.609
atpH
ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (280 aa)
       
      0.554
Psed_3740
long-chain-fatty-acid--CoA ligase (553 aa)
 
     
  0.506
Psed_6230
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein (134 aa)
              0.485
Psed_6221
long-chain-fatty-acid--CoA ligase (509 aa)
         
  0.420
Psed_5934
o-succinylbenzoate--CoA ligase (504 aa)
         
  0.420
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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