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Psed_6268 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6268" - acyl-CoA dehydrogenase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6268acyl-CoA dehydrogenase (346 aa)    
Predicted Functional Partners:
Psed_6266
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein (393 aa)
 
        0.974
Psed_6269
Hypothetical protein (180 aa)
 
          0.972
Psed_6267
Sulfate-transporting ATPase (249 aa)
 
          0.911
Psed_6462
enoyl-CoA hydratase (239 aa)
         
    0.900
Psed_6333
enoyl-CoA hydratase (299 aa)
         
    0.900
Psed_6221
long-chain-fatty-acid--CoA ligase (509 aa)
         
    0.900
Psed_6217
enoyl-CoA hydratase (248 aa)
         
    0.900
Psed_6149
enoyl-CoA hydratase (170 aa)
         
    0.900
Psed_5932
enoyl-CoA hydratase (259 aa)
         
    0.900
Psed_5917
long-chain-fatty-acid--CoA ligase (633 aa)
         
    0.900
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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