STRINGSTRING
Psed_6282 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6282" - Winged helix family transcriptional regulator in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6282Winged helix family transcriptional regulator (1070 aa)    
Predicted Functional Partners:
Psed_3913
LuxR family transcriptional regulator (1027 aa)
   
          0.776
Psed_1706
LuxR family transcriptional regulator (940 aa)
 
          0.764
Psed_6281
Carbamate kinase (325 aa)
   
   
  0.641
Psed_6279
Group 1 glycosyl transferase (394 aa)
         
  0.632
Psed_6280
Protein FdrA (513 aa)
              0.623
Psed_5472
LuxR family transcriptional regulator (1033 aa)
 
          0.596
Psed_6325
Winged helix family transcriptional regulator (1029 aa)
   
          0.588
Psed_3245
ATPase-like protein (1005 aa)
   
          0.559
Psed_3316
LuxR family transcriptional regulator (931 aa)
   
          0.500
psuG
Pseudouridine-5’-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5’- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway (309 aa)
              0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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