STRINGSTRING
Psed_6319 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6319" - Rieske in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6319Rieske (2Fe-2S) domain-containing protein (145 aa)    
Predicted Functional Partners:
Psed_6318
Amidohydrolase (366 aa)
 
     
  0.978
Psed_6317
Amidohydrolase (519 aa)
 
     
  0.977
Psed_1089
Nitrite reductase (NAD(P)H) (517 aa)
 
 
  0.882
Psed_5617
uroporphyrinogen-III C-methyltransferase (513 aa)
   
   
  0.864
Psed_2478
Amidohydrolase (395 aa)
 
     
  0.846
Psed_2581
Amidohydrolase (380 aa)
 
     
  0.841
Psed_1157
Rieske (2Fe-2S) domain-containing protein (117 aa)
 
 
  0.841
Psed_6321
Glyoxalase/bleomycin resistance protein/dioxygenase (142 aa)
   
   
  0.836
Psed_6320
AraC family transcriptional regulator (154 aa)
              0.835
Psed_2727
uroporphyrin-III C-methyltransferase (403 aa)
   
   
  0.828
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (8%) [HD]