STRINGSTRING
Psed_6327 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6327" - LysR family transcriptional regulator in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6327LysR family transcriptional regulator (299 aa)    
Predicted Functional Partners:
Psed_6252
LysR family transcriptional regulator (298 aa)
 
          0.764
Psed_6328
Malate dehydrogenase (387 aa)
              0.677
Psed_3859
LysR family transcriptional regulator (304 aa)
   
          0.628
Psed_0694
LysR family transcriptional regulator (305 aa)
   
          0.527
Psed_6329
Histidine kinase (465 aa)
              0.503
Psed_1925
LysR family transcriptional regulator (311 aa)
   
          0.459
Psed_1568
TetR family transcriptional regulator (262 aa)
   
          0.445
Psed_4135
TetR family transcriptional regulator (196 aa)
   
          0.439
Psed_2639
LysR family transcriptional regulator (315 aa)
 
          0.428
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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