STRINGSTRING
Psed_6328 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6328" - Malate dehydrogenase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6328Malate dehydrogenase (387 aa)    
Predicted Functional Partners:
Psed_6532
Citrate synthase (271 aa)
   
 
  0.905
Psed_0613
Citrate synthase I (434 aa)
   
 
  0.905
Psed_0610
Citrate (Si)-synthase (390 aa)
   
 
  0.905
Psed_3979
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (551 aa)
       
  0.904
Psed_6012
Aspartate transaminase (391 aa)
       
  0.902
Psed_5465
Aspartate transaminase (407 aa)
       
  0.902
Psed_3566
Aspartate transaminase (384 aa)
       
  0.902
Psed_0423
Aspartate transaminase (387 aa)
       
  0.902
fumC
Class II fumarate hydratase (466 aa)
   
 
    0.902
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA (733 aa)
       
    0.900
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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