STRINGSTRING
Psed_6332 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6332" - F420-dependent oxidoreductase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6332F420-dependent oxidoreductase (289 aa)    
Predicted Functional Partners:
Psed_4220
Luciferase-like protein (332 aa)
   
          0.745
Psed_4096
F420-dependent oxidoreductase (312 aa)
   
          0.726
Psed_5506
Luciferase-like protein (334 aa)
 
          0.709
Psed_4225
Luciferase-like protein (347 aa)
   
          0.681
Psed_6234
Luciferase-like protein (356 aa)
   
          0.674
Psed_6479
Luciferase-like protein (391 aa)
   
          0.661
Psed_0299
F420-dependent protein (132 aa)
   
          0.657
Psed_2623
Luciferase-like protein (387 aa)
   
          0.645
Psed_6334
TetR family transcriptional regulator (212 aa)
              0.614
Psed_6333
enoyl-CoA hydratase (299 aa)
              0.614
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (9%) [HD]