STRINGSTRING
Psed_6392 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6392" - Alpha/beta hydrolase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6392Alpha/beta hydrolase (299 aa)    
Predicted Functional Partners:
Psed_2440
Alpha/beta hydrolase (270 aa)
   
          0.657
menD
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) (558 aa)
   
   
  0.612
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (80 aa)
     
 
  0.593
Psed_0214
Alpha/beta hydrolase (296 aa)
   
          0.581
Psed_2837
8-amino-7-oxononanoate synthase (379 aa)
   
 
  0.579
Psed_4125
Alpha/beta hydrolase (270 aa)
   
          0.555
Psed_6391
Hypothetical protein (55 aa)
              0.547
Psed_6316
LuxR family transcriptional regulator (355 aa)
   
          0.530
Psed_5136
Alpha/beta hydrolase (262 aa)
   
          0.530
Psed_3035
3-oxoacid CoA-transferase subunit A (482 aa)
         
  0.527
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (7%) [HD]