STRINGSTRING
Psed_6432 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6432" - Cobyrinic acid ac-diamide synthase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6432Cobyrinic acid ac-diamide synthase (250 aa)    
Predicted Functional Partners:
Psed_3023
Cobaltochelatase subunit CobN (1201 aa)
   
   
    0.919
Psed_3021
precorrin-8X methylmutase (208 aa)
       
    0.900
Psed_6430
Multi-sensor hybrid histidine kinase (1025 aa)
         
  0.870
Psed_6431
Sensor with HAMP domain-containing protein (240 aa)
         
  0.869
Psed_6433
Cyclic nucleotide-binding protein (634 aa)
              0.860
Psed_6429
TetR family transcriptional regulator (184 aa)
              0.543
Psed_6031
Response regulator receiver protein (149 aa)
 
     
  0.533
Psed_4731
RNA polymerase sigma 28 subunit FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (429 aa)
         
  0.498
Psed_3478
SigB/F/G subfamily RNA polymerase sigma-28 subunit (296 aa)
         
  0.498
Psed_3147
SigB/F/G subfamily RNA polymerase sigma-28 subunit (288 aa)
         
  0.498
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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