STRINGSTRING
Psed_6446 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6446" - Alpha/beta hydrolase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6446Alpha/beta hydrolase (283 aa)    
Predicted Functional Partners:
Psed_5927
Aminoglycoside phosphotransferase (328 aa)
   
          0.717
Psed_6447
AraC family transcriptional regulator (336 aa)
 
          0.655
Psed_2663
Peptidase M24 (237 aa)
   
          0.636
Psed_6445
Cytochrome P450 (397 aa)
              0.566
Psed_3178
Type 11 methyltransferase (268 aa)
   
          0.548
Psed_6453
Glyoxalase/bleomycin resistance protein/dioxygenase (200 aa)
 
          0.526
Psed_6448
(2,3-dihydroxybenzoyl)adenylate synthase (553 aa)
              0.488
Psed_3111
Hemerythrin HHE cation binding domain-containing protein (199 aa)
   
          0.473
Psed_3222
Amidohydrolase (412 aa)
   
          0.464
Psed_6449
Monooxygenase FAD-binding protein (380 aa)
              0.450
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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