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Psed_6467 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6467" - 5,10-methylenetetrahydromethanopterin reductase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_64675,10-methylenetetrahydromethanopterin reductase (330 aa)    
Predicted Functional Partners:
Psed_5207
F420-0-gamma-glutamyl ligase (454 aa)
 
   
  0.925
Psed_6469
Hydantoinase/oxoprolinase (521 aa)
 
          0.877
Psed_6468
Hypothetical protein (362 aa)
              0.859
Psed_1331
LPPG-FO 2-phospho-L-lactate transferase (323 aa)
 
   
  0.814
Psed_5208
LPPG-FO 2-phospho-L-lactate transferase (335 aa)
 
   
  0.808
Psed_4225
Luciferase-like protein (347 aa)
   
          0.777
Psed_4096
F420-dependent oxidoreductase (312 aa)
   
          0.771
Psed_1473
F420-dependent oxidoreductase (309 aa)
   
          0.759
Psed_1470
Luciferase-like protein (337 aa)
 
          0.754
Psed_1379
F420-dependent oxidoreductase (304 aa)
   
          0.753
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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