STRINGSTRING
Psed_6497 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6497" - Oxyanion-translocating ATPase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6497Oxyanion-translocating ATPase (393 aa)    
Predicted Functional Partners:
Psed_6498
Oxyanion-translocating ATPase (342 aa)
 
        0.973
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (438 aa)
   
  0.851
Psed_2769
Cyclase (144 aa)
 
   
  0.792
Psed_6499
Hypothetical protein (59 aa)
 
          0.756
Psed_5628
Phospholipid/glycerol acyltransferase (489 aa)
 
        0.749
Psed_0454
Hypothetical protein (99 aa)
   
        0.727
Psed_6500
Endoribonuclease L-PSP (151 aa)
              0.713
Psed_6600
acyl-CoA dehydrogenase (619 aa)
 
          0.691
Psed_6501
Hypothetical protein (203 aa)
              0.636
Psed_0209
Hypothetical protein (184 aa)
   
          0.629
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (5%) [HD]