STRINGSTRING
Psed_6575 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6575" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6575Hypothetical protein (151 aa)    
Predicted Functional Partners:
Psed_6574
Tetracycline repressor (204 aa)
 
          0.864
Psed_6576
ATP-binding membrane protein (198 aa)
              0.856
Psed_3267
Glyoxalase/bleomycin resistance protein/dioxygenase (138 aa)
   
          0.642
Psed_6573
Monooxygenase FAD-binding protein (359 aa)
              0.580
Psed_4450
Hypothetical protein (126 aa)
   
          0.577
Psed_1098
DoxX family protein (124 aa)
   
          0.563
Psed_6410
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin (219 aa)
   
          0.549
Psed_1064
Hypothetical protein (178 aa)
   
          0.523
Psed_0670
Hypothetical protein (328 aa)
   
          0.489
Psed_3336
Hypothetical protein (179 aa)
   
          0.464
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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