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Psed_6597 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6597" - Isoquinoline 1-oxidoreductase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6597Isoquinoline 1-oxidoreductase (753 aa)    
Predicted Functional Partners:
Psed_6596
Isoquinoline 1-oxidoreductase (152 aa)
 
  0.992
Psed_0760
NADH dehydrogenase (ubiquinone) 30 kDa subunit (504 aa)
       
      0.980
Psed_0269
Isoquinoline 1-oxidoreductase (156 aa)
 
  0.949
Psed_2358
(2Fe-2S)-binding protein (150 aa)
 
  0.903
Psed_3754
(2Fe-2S)-binding protein (161 aa)
 
  0.888
Psed_1762
Carbon-monoxide dehydrogenase (156 aa)
 
  0.836
Psed_6471
Xanthine dehydrogenase (155 aa)
 
  0.829
Psed_6138
Carbon-monoxide dehydrogenase (200 aa)
 
  0.827
Psed_5676
Carbon-monoxide dehydrogenase (171 aa)
 
  0.827
Psed_2251
Carbon-monoxide dehydrogenase (180 aa)
 
  0.819
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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