STRINGSTRING
Psed_6663 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6663" - PadR-like family transcriptional regulator in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Psed_6663PadR-like family transcriptional regulator (193 aa)    
Predicted Functional Partners:
Psed_6664
Inositol 1-phosphate synthase (359 aa)
   
   
  0.908
Psed_0209
Hypothetical protein (184 aa)
 
          0.743
Psed_1116
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (125 aa)
   
          0.730
Psed_6662
Hypothetical protein (180 aa)
              0.721
prcA
Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (267 aa)
   
        0.666
Psed_5649
Major facilitator superfamily protein (662 aa)
 
   
  0.641
pafA
Proteasome accessory factor PafA; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine (453 aa)
   
          0.621
Psed_3321
RecB family exonuclease (371 aa)
   
          0.617
Psed_4545
Cytochrome-c oxidase; Part of cytochrome c oxidase, its function is unknown (132 aa)
   
          0.612
Psed_2769
Cyclase (144 aa)
   
          0.587
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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