STRINGSTRING
Psed_6671 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6671" - Major facilitator superfamily protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6671Major facilitator superfamily protein (452 aa)    
Predicted Functional Partners:
Psed_2758
Hypothetical protein (182 aa)
 
   
  0.788
Psed_4708
GCN5-like N-acetyltransferase (277 aa)
 
          0.735
Psed_6670
Hypothetical protein (201 aa)
   
        0.690
Psed_6674
Hypothetical protein (784 aa)
 
        0.654
Psed_0589
Hypothetical protein (266 aa)
   
          0.632
Psed_2007
Hypothetical protein (259 aa)
   
        0.626
Psed_5563
NADH-quinone oxidoreductase subunit G (820 aa)
   
   
  0.611
Psed_0691
Hypothetical protein (179 aa)
   
          0.611
Psed_5604
Excisionase (72 aa)
   
          0.606
Psed_2786
Hypothetical protein (230 aa)
   
          0.605
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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