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Psed_6685 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_6685" - parB-like partition protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6685parB-like partition protein (320 aa)    
Predicted Functional Partners:
Psed_6686
Cobyrinic acid ac-diamide synthase (286 aa)
 
  0.995
Psed_3810
Cobyrinic acid ac-diamide synthase (311 aa)
 
  0.922
Psed_4237
Cobyrinic acid ac-diamide synthase (314 aa)
 
 
  0.909
Psed_2792
Cobyrinic acid ac-diamide synthase (295 aa)
 
 
  0.909
Psed_4628
DNA translocase FtsK (782 aa)
 
   
  0.804
Psed_5227
DNA translocase FtsK (279 aa)
 
   
  0.772
rsmG
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA (218 aa)
   
   
  0.748
dnaA
Chromosome replication initiator DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (555 aa)
 
 
  0.747
Psed_6688
Single-stranded nucleic acid binding R3H domain-containing protein (174 aa)
   
   
  0.664
rpmH
50S ribosomal protein L34 (47 aa)
         
  0.630
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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