STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIPSTDRAFT_652Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (639 aa)    
Predicted Functional Partners:
A0A1E3Q7S8
Uncharacterized protein.
   
 0.997
A0A1E3PXE4
CNH domain-containing protein.
   
 0.996
A0A1E3Q112
E3 ubiquitin-protein ligase PEP5.
   
 0.996
A0A1E3Q1F7
Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.
    
 0.996
A0A1E3Q7N7
Pep3_Vps18 domain-containing protein.
   
 0.996
A0A1E3Q7R4
CNH domain-containing protein.
   
 0.993
A0A1E3QD43
Vps8 domain-containing protein.
    
 
 0.976
A0A1E3Q9R0
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.975
A0A1E3PY32
Uncharacterized protein.
    
 
 0.971
A0A1E3QAW0
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.969
Your Current Organism:
Lipomyces starkeyi
NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557
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