Automated, unsupervised textmining - searching for proteins that are frequently mentioned together.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Transporter, major facilitator family protein (391 aa)
Predicted Functional Partners:
Transporter, small conductance mechanosensitive ion channel MscS family protein (792 aa)
Uncharacterized protein (686 aa)
TonB-dependent receptor plug domain protein (686 aa)
Ketopantoate hydroxymethyltransferase ; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (272 aa)
Uncharacterized protein (228 aa)
Uncharacterized protein (469 aa)
Uncharacterized protein (162 aa)
Acyltransferase (353 aa)
Uncharacterized protein (280 aa)
Uncharacterized protein (384 aa)
Your Current Organism:
NCBI taxonomy Id: 679191 Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A