STRINGSTRING
HMPREF9018_0008 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0008" - DNA helicase in Prevotella amnii
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0008DNA helicase (892 aa)    
Predicted Functional Partners:
HMPREF9018_0706
ATP-dependent DNA helicase, RecQ family (631 aa)
   
  0.922
recQ
ATP-dependent DNA helicase RecQ (727 aa)
   
  0.922
HMPREF9018_0009
Acetyltransferase, GNAT family (191 aa)
 
          0.884
polA
DNA-directed DNA polymerase (945 aa)
   
 
  0.852
mutL
DNA mismatch repair protein MutL ; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (645 aa)
   
 
  0.822
dnaN
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (374 aa)
   
 
  0.807
HMPREF9018_0491
DNA helicase (845 aa)
   
   
 
0.797
HMPREF9018_1330
DEAD/DEAH box helicase (567 aa)
   
  0.769
HMPREF9018_0895
DEAD/DEAH box helicase (438 aa)
   
  0.769
HMPREF9018_0079
DEAD/DEAH box helicase (613 aa)
   
  0.769
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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