STRINGSTRING
HMPREF9018_0011 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0011" - Uncharacterized protein in Prevotella amnii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMPREF9018_0011Uncharacterized protein (205 aa)    
Predicted Functional Partners:
HMPREF9018_0012
Peptidase family M49 (658 aa)
 
          0.897
HMPREF9018_0013
Transcriptional regulator, AraC family (155 aa)
              0.862
HMPREF9018_1373
Uncharacterized protein (297 aa)
   
          0.746
HMPREF9018_1075
Uncharacterized protein (205 aa)
   
          0.659
HMPREF9018_1903
Uncharacterized protein (219 aa)
   
          0.656
HMPREF9018_0885
Uncharacterized protein (479 aa)
   
          0.643
HMPREF9018_0601
Uncharacterized protein (222 aa)
   
          0.608
HMPREF9018_0222
Uncharacterized protein (309 aa)
   
          0.602
HMPREF9018_0261
Uncharacterized protein (219 aa)
   
          0.593
HMPREF9018_1098
Uncharacterized protein (310 aa)
   
          0.555
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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