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HMPREF9018_0090 protein (Prevotella amnii) - STRING interaction network
"HMPREF9018_0090" - Type III restriction enzyme, res subunit in Prevotella amnii
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
HMPREF9018_0090Type III restriction enzyme, res subunit (547 aa)    
Predicted Functional Partners:
rpoB
Transcriptase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1269 aa)
   
  0.948
rpoC
Transcriptase subunit beta’ ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1457 aa)
   
  0.947
rpoA
Transcriptase subunit alpha ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (332 aa)
     
    0.941
HMPREF9018_0093
Type III restriction enzyme, res subunit (1022 aa)
 
          0.924
HMPREF9018_0091
DNA (Cytosine-5-)-methyltransferase (634 aa)
 
          0.903
dnaN
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (374 aa)
     
  0.857
polA
DNA-directed DNA polymerase (945 aa)
   
  0.836
recA
Recombinase A ; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (341 aa)
   
 
  0.806
HMPREF9018_1953
Uncharacterized protein (381 aa)
     
    0.792
HMPREF9018_0119
Uracil phosphoribosyltransferase (219 aa)
     
    0.782
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 679191
Other names: P. amnii, P. amnii CRIS 21A-A, Prevotella amnii, Prevotella amnii CRIS 21A-A, Prevotella amnii Lawson et al. 2008, Prevotella amnii str. CRIS 21A-A, Prevotella amnii strain CRIS 21A-A
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